Evaluation of hybrid and non-hybrid methods forde novoassembly of nanopore reads
نویسندگان
چکیده
منابع مشابه
Evaluation of hybrid and non-hybrid methods for de novo assembly of nanopore reads
MOTIVATION Recent emergence of nanopore sequencing technology set a challenge for established assembly methods. In this work, we assessed how existing hybrid and non-hybrid de novo assembly methods perform on long and error prone nanopore reads. RESULTS We benchmarked five non-hybrid (in terms of both error correction and scaffolding) assembly pipelines as well as two hybrid assemblers which ...
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ژورنال
عنوان ژورنال: Bioinformatics
سال: 2016
ISSN: 1367-4803,1460-2059
DOI: 10.1093/bioinformatics/btw237